miRBase entry: ipu-mir-221-1

Stem-loop ipu-mir-221-1


Accession
MI0024584
Description
Ictalurus punctatus ipu-mir-221-1 precursor miRNA
Gene family
MIPF0000051; mir-221


Sequence

accuggcauacaauguagauuucugugugguacuaucuacAGCUACAUUGUCUGCUGGGUUU
((((((((.(((((((((....(((((.(((...))))))))))))))))).))))))))..

Structure
--        u         auuu     u   a 
  accuggca acaauguag    cugug ggu  
  |||||||| |||||||||    ||||| ||| c
  UGGGUCGU UGUUACAUC    GAcau cua  
UU        C         ----     -   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-221

Accession MIMAT0029476
Description Ictalurus punctatus ipu-miR-221 mature miRNA
Sequence 41 - AGCUACAUUGUCUGCUGGGUUU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174