miRBase entry: ipu-mir-23a-1

Stem-loop ipu-mir-23a-1


Accession
MI0024593
Description
Ictalurus punctatus ipu-mir-23a-1 precursor miRNA
Gene family
MIPF0000027; mir-23


Sequence

ggguuccuggcaccgugauuugguggauaaacagaaaugaaaAUCACAUUGCCAGGGAUUUCC
.(((((((((((..(((((((..((......)).......)))))))..)))))))))))...

Structure
--g           cc       -----gg  ga 
   gguuccuggca  gugauuu       ug  u
   |||||||||||  |||||||       ||   
   UUAGGGACCGU  CACUAaa       ac  a
CCU           UA       aguaaag  aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-23a

Accession MIMAT0029481
Description Ictalurus punctatus ipu-miR-23a mature miRNA
Sequence 43 - AUCACAUUGCCAGGGAUUUCC - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174