Stem-loop ipu-mir-27d

Accession

MI0024607

Description

Ictalurus punctatus ipu-mir-27d precursor miRNA

Gene family

MIPF0000036; mir-27

Sequence

gcagagcuuggcugauuggugaacgugcauggcuuguguuuuugUUCACAGUGGCUAAGUUCUUCAC
(.(((((((((((.((((.((((((.((((.....))))...))))))))))))))))))))).)..

Structure

-- c           g    g      --u    g 
  g agagcuuggcu auug ugaacg   gcau g
  | ||||||||||| |||| ||||||   |||| c
  C UCUUGAAUCGG UGAC ACUUgu   ugug u
CA U           -    -      uuu    u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-27d

• Accession: MIMAT0029490
• Description: Ictalurus punctatus ipu-miR-27d mature miRNA
• Sequence: 45 - UUCACAGUGGCUAAGUUCUUCAC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174