Stem-loop ipu-mir-27e

Accession

MI0024608

Description

Ictalurus punctatus ipu-mir-27e precursor miRNA

Gene family

MIPF0000036; mir-27

Sequence

agagcuuagcuaaucggugagcauugaucccuuaagaaaacugUUCACAGUGGCUAAGUUCAGU
.(((((((((((....(((((((.(..((......))..).)))))))..)))))))))))...

Structure

--a           aucg       u ga  cc 
   gagcuuagcua    gugagca u  uc  u
   |||||||||||    ||||||| |  ||   
   CUUGAAUCGGU    CACUUgu a  ag  u
UGA           --GA       c aa  aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-27e

• Accession: MIMAT0029491
• Description: Ictalurus punctatus ipu-miR-27e mature miRNA
• Sequence: 44 - UUCACAGUGGCUAAGUUCAGU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174