miRBase entry: ipu-mir-29c

Stem-loop ipu-mir-29c


Accession
MI0024609
Description
Ictalurus punctatus ipu-mir-29c precursor miRNA
Gene family
MIPF0000009; mir-29


Sequence

CUGGUUUCACAUGGUGGUUUAGAuguguucuaccaaagucuagcaccauuugaaaucagug
(((((((((.((((((..((((((.((......))..)))))))))))).)))))))))..

Structure
--         C      GU      -g  uu 
  CUGGUUUCA AUGGUG  UUAGAu  ug  c
  ||||||||| ||||||  ||||||  ||   
  gacuaaagu uaccac  gaucug  ac  u
gu         u      --      aa  ca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-29c

Accession MIMAT0029492
Description Ictalurus punctatus ipu-miR-29c mature miRNA
Sequence 1 - CUGGUUUCACAUGGUGGUUUAGA - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174