miRBase entry: ipu-mir-301a

Stem-loop ipu-mir-301a


Accession
MI0024611
Description
Ictalurus punctatus ipu-mir-301a precursor miRNA
Gene family
MIPF0000034; mir-130


Sequence

ucugacuucauugcacuacuguauuggacagcuagCAGUGCAAUAGUAUUGUCAAAGC
..((((..(((((((((.((((........)).)).)))))))).)....))))....

Structure
--uc    --uu -        a  -  auu 
    ugac    c auugcacu cu gu   g
    ||||    | |||||||| || ||    
    ACUG    G UAACGUGA ga cg   g
CGAA    UUAU A        C  u  aca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-301a

Accession MIMAT0029494
Description Ictalurus punctatus ipu-miR-301a mature miRNA
Sequence 36 - CAGUGCAAUAGUAUUGUCAAAGC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174