miRBase entry: ipu-mir-30e

Stem-loop ipu-mir-30e


Accession
MI0024617
Description
Ictalurus punctatus ipu-mir-30e precursor miRNA
Gene family
MIPF0000005; mir-30


Sequence

uguaaacauccuugacuggaagcuggugcacaugauggagCUUUCAGUCGGAUGUUUGCAGC
(((((((((((..(((((((((((....(....)....))))))))))))))))))))))..

Structure
--           uu           ggug a 
  uguaaacaucc  gacuggaagcu    c c
  |||||||||||  |||||||||||    |  
  ACGUUUGUAGG  CUGACUUUCga    g a
CG           --           ggua u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-30e

Accession MIMAT0029500
Description Ictalurus punctatus ipu-miR-30e mature miRNA
Sequence 41 - CUUUCAGUCGGAUGUUUGCAGC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174