miRBase entry: ipu-mir-34a

Stem-loop ipu-mir-34a


Accession
MI0024622
Description
Ictalurus punctatus ipu-mir-34a precursor miRNA
Gene family
MIPF0000039; mir-34


Sequence

UGGCAGUGUCUUAGCUGGUUGUuguguggagugagaacgaagcaaucagcaaguauacugccgca
.(((((((((((.((((((((((.(((.........))).))))))))))))).))))))))...

Structure
--U        -   A          g   gga 
   GGCAGUGU CUU GCUGGUUGUu ugu   g
   |||||||| ||| |||||||||| |||   u
   ccgucaua gaa cgacuaacga gca   g
acg        u   -          a   aga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-34a

Accession MIMAT0029503
Description Ictalurus punctatus ipu-miR-34a mature miRNA
Sequence 1 - UGGCAGUGUCUUAGCUGGUUGU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174