miRBase entry: ipu-mir-34c

Stem-loop ipu-mir-34c


Accession
MI0024624
Description
Ictalurus punctatus ipu-mir-34c precursor miRNA


Sequence

aggcagugcaguuaguugauuacaauccauaaaguAAUCACUAACCUCACUACCAGG
.((.((((..((((((.((((((..........))))))))))))..)))).))...

Structure
--a  c    ca      u      aauc 
   gg agug  guuagu gauuac    c
   || ||||  |||||| ||||||     
   CC UCAC  CAAUCA CUAAug    a
GGA  A    UC      -      aaau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-34c

Accession MIMAT0029505
Description Ictalurus punctatus ipu-miR-34c mature miRNA
Sequence 36 - AAUCACUAACCUCACUACCAGG - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174