miRBase entry: ipu-mir-429b

Stem-loop ipu-mir-429b


Accession
MI0024631
Description
Ictalurus punctatus ipu-mir-429b precursor miRNA
Gene family
MIPF0000019; mir-8


Sequence

ucuuaccaggcaaguuuagauguugauacugugucUAAUACUGCCUGGUAAUGCCA
..((((((((((.((((((((((....))...)))))).)))))))))))).....

Structure
---uc          a  -      ---  u 
     uuaccaggca gu uuagau   gu g
     |||||||||| || ||||||   ||  
     AAUGGUCCGU CA AAUcug   ca a
ACCGU          -  U      ugu  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-429b

Accession MIMAT0029510
Description Ictalurus punctatus ipu-miR-429b mature miRNA
Sequence 36 - UAAUACUGCCUGGUAAUGCCA - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174