miRBase entry: ipu-mir-456

Stem-loop ipu-mir-456


Accession
MI0024635
Description
Ictalurus punctatus ipu-mir-456 precursor miRNA
Gene family
MIPF0000341; mir-456


Sequence

gcaggcaucuuuccagucuacauguggauccaggagucugCAGGCUGGUUAGAUGGUUGUCA
((((.(((((..(((((((....((((((......)))))))))))))..))))).))))..

Structure
--    g     uu       acau      cc 
  gcag caucu  ccagucu    guggau  a
  |||| |||||  |||||||    ||||||   
  UGUU GUAGA  GGUCGGA    Cgucug  g
AC    G     UU       ----      ag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-456

Accession MIMAT0029514
Description Ictalurus punctatus ipu-miR-456 mature miRNA
Sequence 41 - CAGGCUGGUUAGAUGGUUGUCA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174