Stem-loop ipu-mir-458

Accession

MI0024637

Description

Ictalurus punctatus ipu-mir-458 precursor miRNA

Gene family

MIPF0000179; mir-458

Sequence

agcgccauuuacagagcuauaagcaucauaguugucAUAGCUCUUUGAAUGGUACUGC
((.((((((((.((((((((..(((.......))).)))))))).)))))))).))..

Structure

--  c        c        aa   uc 
  ag gccauuua agagcuau  gca  a
  || |||||||| ||||||||  |||  u
  UC UGGUAAGU UCUCGAUA  ugu  a
CG  A        U        -c   ug 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-458

• Accession: MIMAT0029516
• Description: Ictalurus punctatus ipu-miR-458 mature miRNA
• Sequence: 37 - AUAGCUCUUUGAAUGGUACUGC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174