miRBase entry: ipu-mir-7b

Stem-loop ipu-mir-7b


Accession
MI0024656
Description
Ictalurus punctatus ipu-mir-7b precursor miRNA
Gene family
MIPF0000022; mir-7


Sequence

UGGAAGACUUGUGAUUUUGUUGUuguuaguuagaugaagugacaacaaaucacggucugcccua
.((.(((((.((((((....((((((((.((.....)).))))))))))))))))))).))...

Structure
--U  A     U      UUGU        g  a 
   GG AGACU GUGAUU    UGUuguua uu g
   || ||||| ||||||    |||||||| || a
   cc ucugg cacuaa    acaacagu aa u
auc  g     -      ----        g  g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-7b

Accession MIMAT0029527
Description Ictalurus punctatus ipu-miR-7b mature miRNA
Sequence 1 - UGGAAGACUUGUGAUUUUGUUGU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174