miRBase entry: ipu-mir-7547

Stem-loop ipu-mir-7547


Accession
MI0024671
Description
Ictalurus punctatus ipu-mir-7547 precursor miRNA


Sequence

AGCGGCGUCAGAAGCGAUGGCCgugucucuauccaauaggucgggucgcuaaugacgucacc
...(((((((..((((((((((................))))..))))))..)))))))...

Structure
AGC       GA      --    gugucuc 
   GGCGUCA  AGCGAU  GGCC       u
   |||||||  ||||||  ||||        
   cugcagu  ucgcug  cugg       a
cca       aa      gg    auaaccu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-7547

Accession MIMAT0029535
Description Ictalurus punctatus ipu-miR-7547 mature miRNA
Sequence 1 - AGCGGCGUCAGAAGCGAUGGCC - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174