miRBase entry: ipu-mir-551

Stem-loop ipu-mir-551


Accession
MI0024678
Description
Ictalurus punctatus ipu-mir-551 precursor miRNA


Sequence

aaaccaagcauggguguggccugaauccuccaaugGCGACCCAUCCUUGGUUUCU
((((((((.((((((...(((.............))).)))))).))))))))..

Structure
--        c      gug   ugaau 
  aaaccaag augggu   gcc     c
  |||||||| ||||||   |||     c
  UUUGGUUC UACCCA   CGg     u
UC        C      --G   uaacc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-551

Accession MIMAT0029542
Description Ictalurus punctatus ipu-miR-551 mature miRNA
Sequence 36 - GCGACCCAUCCUUGGUUUCU - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174