miRBase entry: ipu-mir-129b

Stem-loop ipu-mir-129b


Accession
MI0024680
Description
Ictalurus punctatus ipu-mir-129b precursor miRNA
Gene family
MIPF0000073; mir-129

Literature search
1 open access papers mention ipu-mir-129b
(1 sentences)

Sequence

UUUGGGGUAAGGGCUUCCUGGCUacugguucaaggaacagcaagcccagaccgcaaaaa
((((.(((..((((((.(((....((......))...))).))))))..))).))))..

Structure
--    G   AA      C   GCUa  gg 
  UUUG GGU  GGGCUU CUG    cu  u
  |||| |||  |||||| |||    ||   
  aaac cca  cccgaa gac    ga  u
aa    g   ga      c   -aag  ac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-129b

Accession MIMAT0029544
Description Ictalurus punctatus ipu-miR-129b mature miRNA
Sequence 1 - UUUGGGGUAAGGGCUUCCUGGCU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174