miRBase entry: ipu-mir-7550

Stem-loop ipu-mir-7550


Accession
MI0024681
Description
Ictalurus punctatus ipu-mir-7550 precursor miRNA


Sequence

AUCCGGCUCGAAGGACCAauuuuguagaggaguuagcugguucuuaggugaauuu
...((.((..(((((((((((((.....)))))....)))))))))).)).....

Structure
--AUC  G  CG        ----     g 
     CG CU  AAGGACCA    auuuu u
     || ||  ||||||||    ||||| a
     gu ga  uucuuggu    ugagg g
uuuaa  g  --        cgau     a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-7550

Accession MIMAT0029545
Description Ictalurus punctatus ipu-miR-7550 mature miRNA
Sequence 1 - AUCCGGCUCGAAGGACCA - 18
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174