miRBase entry: ipu-mir-7557

Stem-loop ipu-mir-7557


Accession
MI0024689
Description
Ictalurus punctatus ipu-mir-7557 precursor miRNA


Sequence

UGCUUGCGUUCUGUCUGUUCCCUcuguggucauuuaacagaaugcagacaguuccugggc
.(((((.(..((((((((....(((((.........)))))..))))))))..).)))))

Structure
U     C UU        UCCC     ggu 
 GCUUG G  CUGUCUGU    Ucugu   c
 ||||| |  ||||||||    |||||   a
 cgggu c  gacagacg    agaca   u
-     c uu        --ua     auu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-7557

Accession MIMAT0029553
Description Ictalurus punctatus ipu-miR-7557 mature miRNA
Sequence 1 - UGCUUGCGUUCUGUCUGUUCCCU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174