Stem-loop ipu-mir-7564

Accession

MI0024699

Description

Ictalurus punctatus ipu-mir-7564 precursor miRNA

Gene family

MIPF0001709; mir-7563

Sequence

ACCGCGUACUUACCUACUGUAUaguagcugauauacauguauuuugucuacuauaggccuauaguaggcgaguacacgguuu
((((.((((((.((((((((((((((((.(((((....)))))..).))))))......))))))))).)))))).))))..

Structure

--    C      A         ------      - -u     a 
  ACCG GUACUU CCUACUGUA      Uaguag c  gauau c
  |||| |||||| |||||||||      |||||| |  |||||  
  uggc caugag ggaugauau      aucauc g  uuaug a
uu    a      c         ccggau      u uu     u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-7564

• Accession: MIMAT0029563
• Description: Ictalurus punctatus ipu-miR-7564 mature miRNA
• Sequence: 1 - ACCGCGUACUUACCUACUGUAU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174