miRBase entry: ipu-mir-7571

Stem-loop ipu-mir-7571


Accession
MI0024706
Description
Ictalurus punctatus ipu-mir-7571 precursor miRNA

Literature search
1 open access papers mention ipu-mir-7571
(2 sentences)

Sequence

gaggugguaacaguaacucgacucgacaauaacauguCAGGCUACAUGACACCACCCUGA
..((((((..(((((.((.(((.............))).)).))).))..))))))....

Structure
--ga      aa  -   a  c   ucgac 
    gguggu  ca gua cu gac     a
    ||||||  || ||| || |||     a
    CCACCA  GU CAU GG Cug     u
AGUC      CA  A   C  A   uacaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-7571

Accession MIMAT0029570
Description Ictalurus punctatus ipu-miR-7571 mature miRNA
Sequence 38 - CAGGCUACAUGACACCACCCUGA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174