Stem-loop sequence tgu-mir-7643

Accession

MI0024980 (change log)

Description

Taeniopygia guttata miR-7643 stem-loop

Literature search

1 open access papers mention tgu-mir-7643
(1 sentences)

Stem-loop

   ---------------------------------       aag  -        c  -    c    aaug  c 
5'                                  caagggg   gu gacugaga au gaug ucau    ac u
                                    |||||||   || |||||||| || |||| ||||    ||  
3'                                  guucccu   ca cugacucu ug cuac agua    ug u
   aaguguuuucggugacaguccuacucccguuua       caa  a        u  u    -    --aa  u 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (taeGlu3.2.4): chr1: 95578094-95578205 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0024980

Mature sequence tgu-miR-7643-5p

• Accession: MIMAT0029786
• Sequence: 11 - gugacugagacaugaugcucau - 32
• Evidence: experimental; Illumina [1]

Mature sequence tgu-miR-7643-3p

• Accession: MIMAT0029787
• Sequence: 49 - gacaucuguuucucagucaaca - 70
• Evidence: experimental; Illumina [1]

References

1. PMID:23268654 "Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression" Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X BMC Genomics. 13:727(2012).