miRBase entry: mmu-mir-290b

Stem-loop mmu-mir-290b


Accession
MI0025038
Symbol
MGI: Mir290b
Description
Mus musculus mmu-mir-290b precursor miRNA

Literature search
53 open access papers mention mmu-mir-290b
(432 sentences)

Sequence

45678 reads, 24 reads per million, 33 experiments
GCUUAAAACUAGGCGGCACUUUuuaaagaaaaaaaaAAGUGCCCCCAUAGUUUGAGUA
(((((((.(((((.((((((((((.........)))))))))).)).)))))))))).

Structure
-       A   -  C          aaa 
 GCUUAAA CUA GG GGCACUUUuu   g
 ||||||| ||| || ||||||||||   a
 UGAGUUU GAU CC CCGUGAAaaa   a
A       -   A  C          aaa 


Annotation confidence Not enough data
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Genome context
chr7: 3218638-3218695 [-]
Clustered miRNAs
8 other miRNAs are < 10 kb from mmu-mir-290b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-290b-5p

Accession MIMAT0029900
Description Mus musculus mmu-miR-290b-5p mature miRNA
Sequence 1 - GCUUAAAACUAGGCGGCACUUU - 22
Evidence experimental
RNAseq [1]

Mature mmu-miR-290b-3p

Accession MIMAT0029901
Description Mus musculus mmu-miR-290b-3p mature miRNA
Sequence 37 - AAGUGCCCCCAUAGUUUGAGUA - 58
Evidence experimental
RNAseq [1]

References

  1. PubMed ID: 23325850
    Deep sequencing of small RNAs identifies canonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues
    "Castellano L, Stebbing J"
    "Nucleic Acids Res (2013) 41:3339-3351