miRBase entry: bta-mir-6523b

Stem-loop bta-mir-6523b


Accession
MI0025195
Description
Bos taurus bta-mir-6523b precursor miRNA


Sequence

reads, None reads per million, experiments
cuggggacacuagagcaggguaugaaauacaauucaucccCUGCUCAAAGUUACCCCAG
((((((..(((.((((((((.(((((......))))).))))))))..)))..))))))

Structure
      ac   -a        u     au 
cugggg  acu  gagcaggg augaa  a
||||||  |||  |||||||| |||||   
GACCCC  UGA  CUCGUCcc uacuu  c
      AU   AA        c     aa 


Annotation confidence Not enough data
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Genome context
chr24: 46294919-46294977 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-6523b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-6523b

Accession MIMAT0029951
Description Bos taurus bta-miR-6523b mature miRNA
Sequence 41 - CUGCUCAAAGUUACCCCAG - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23100578
    Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
    "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
    "J Anim Sci (2013) 91:90-103