Stem-loop mtr-MIR7696a

Accession

MI0025222

Description

Medicago truncatula mtr-MIR7696a precursor miRNA

Gene family

MIPF0001669; MIR7696

Literature search

1 open access papers mention mtr-MIR7696a
(2 sentences)

Sequence

ugcuUCAAGUUCUCAUAAUUCAAAAagauaaguuacauuugaaaaacuuccauaaacuuuucguuUUGAAUUAUGAGAACUUGAAGca
(((((((((((((((((((((((((.((.(((((......(((....)))....))))).)).)))))))))))))))))))))))))

Structure

                         a  u     acauuu   a 
ugcuUCAAGUUCUCAUAAUUCAAAA ga aaguu      gaa a
||||||||||||||||||||||||| || |||||      |||  
acGAAGUUCAAGAGUAUUAAGUUuu cu uucaa      cuu a
                         g  u     --auac   c 

Annotation confidence Not enough data

Genome context

AC225474.24: 39292-39379 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from mtr-MIR7696a

Mature mtr-miR7696a-5p

• Accession: MIMAT0029986
• Description: Medicago truncatula mtr-miR7696a-5p mature miRNA
• Sequence: 5 - UCAAGUUCUCAUAAUUCAAAA - 25
• Evidence: experimental ; Illumina [1]

Mature mtr-miR7696a-3p

• Accession: MIMAT0029987
• Description: Medicago truncatula mtr-miR7696a-3p mature miRNA
• Sequence: 66 - UUGAAUUAUGAGAACUUGAAG - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23572382
   microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula
   "Eyles RP, Williams PH, Ohms SJ, Weiller GF, Ogilvie HA, Djordjevic MA, Imin N"
   "Planta (2013) 238:91-105