miRBase entry: oar-let-7a

Stem-loop oar-let-7a


Accession
MI0025243
Description
Ovis aries oar-let-7a precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
16 open access papers mention oar-let-7a
(51 sentences)

Sequence

216705 reads, 74132 reads per million, 16 experiments
ugggaUGAGGUAGUAGGUUGUAUAGUUuuagggucacacccaccgcugggagauaacuauacaaucuacugucuuuccua
(((((.(((((((((((((((((((((.....(((...((((....)))).)))))))))))))))))))))))))))))

Structure
     U                     uuagg   aca    c 
uggga GAGGUAGUAGGUUGUAUAGUU     guc   ccca c
||||| |||||||||||||||||||||     |||   ||||  
auccu uucugucaucuaacauaucaa     uag   gggu g
     -                     -----   --a    c 


Annotation confidence Not enough data
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Genome context
chr2: 27329964-27330043 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from oar-let-7a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oar-let-7a

Accession MIMAT0030022
Description Ovis aries oar-let-7a mature miRNA
Sequence 6 - UGAGGUAGUAGGUUGUAUAGUU - 27
Evidence experimental
cloned [1]

References

  1. PubMed ID: 23269700
    MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
    "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
    "Physiol Genomics (2013) 45:151-161