miRBase entry: oar-mir-16b

Stem-loop oar-mir-16b


Accession
MI0025257
Description
Ovis aries oar-mir-16b precursor miRNA
Gene family
MIPF0000006; mir-15

Literature search
4 open access papers mention oar-mir-16b
(10 sentences)

Sequence

327813 reads, 58773 reads per million, 13 experiments
cauacuuguuccgcucUAGCAGCACGUAAAUAUUGGgguaguaaaauaaauauuaaacaccaauauuauugugcugcuuuagcgugacaggga
....((((((.((((..(((((((((..((((((((..(((((.......)))))....))))))))..)))))))))..)))).))))))..

Structure
caua      c    cU         UA        --gg     aa 
    cuuguu cgcu  AGCAGCACG  AAUAUUGG    uagua  a
    |||||| ||||  |||||||||  ||||||||    |||||  u
    ggacag gcga  ucgucgugu  uuauaacc    auuau  a
--ag      u    uu         ua        acaa     aa 


Annotation confidence Not enough data
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Genome context
chr1: 224971191-224971283 [-]

Database links

Mature oar-miR-16b

Accession MIMAT0030036
Description Ovis aries oar-miR-16b mature miRNA
Sequence 17 - UAGCAGCACGUAAAUAUUGG - 36
Evidence experimental
cloned [1]

References

  1. PubMed ID: 23269700
    MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
    "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
    "Physiol Genomics (2013) 45:151-161