Stem-loop oar-mir-199a

Accession

MI0025262

Description

Ovis aries oar-mir-199a precursor miRNA

Gene family

MIPF0000040; mir-199

Literature search

5 open access papers mention oar-mir-199a
(24 sentences)

Sequence

73495 reads, 12377 reads per million, 13 experiments

uggaagcuucuggagauccugcuccgucgccccaguguucagacuaccuguucaggacaaugccguuguACAGUAGUCUGCACAUUGGUUagacugggcaaggg
.................(((((((.(((...(((((((.((((((((.(((.((((......))..)).))))))))))).)))))))...))).)))).))).

Structure

uggaagcuucuggagau   -    c   gcc       u        c   u  --  ac 
                 ccu gcuc guc   ccagugu cagacuac ugu ca  gg  a
                 ||| |||| |||   ||||||| |||||||| ||| ||  ||   
                 gga cggg cag   GGUUACA GUCUGAUG ACA gu  cc  a
----------------g   a    u   aUU       C        -   u  ug  gu 

Annotation confidence High

Genome context

chr12: 37693649-37693752 [-]

Mature oar-miR-199a-3p

• Accession: MIMAT0030040
• Description: Ovis aries oar-miR-199a-3p mature miRNA
• Sequence: 70 - ACAGUAGUCUGCACAUUGGUU - 90
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161