miRBase entry: oar-mir-200c

Stem-loop oar-mir-200c


Accession
MI0025266
Description
Ovis aries oar-mir-200c precursor miRNA
Gene family
MIPF0000019; mir-8

Literature search
5 open access papers mention oar-mir-200c
(6 sentences)

Sequence

6057 reads, 2366 reads per million, 11 experiments
cgucuuacccagcaguguuugggugcugguugggagucucUAAUACUGCCGGGUAAUGAUGGagg
((((((((((.((((((((.(((.(((.......)))))).)))))))).)))))).))))....

Structure
----    -      a        u   u   gg 
    cguc uuaccc gcaguguu ggg gcu  u
    |||| |||||| |||||||| ||| |||  u
    GUAG AAUGGG CGUCAUAA cuc uga  g
ggaG    U      C        U   -   gg 


Annotation confidence Not enough data
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Genome context
chr3: 207226030-207226094 [-]

Database links

Mature oar-miR-200c

Accession MIMAT0030044
Description Ovis aries oar-miR-200c mature miRNA
Sequence 41 - UAAUACUGCCGGGUAAUGAUGG - 62
Evidence experimental
cloned [1]

References

  1. PubMed ID: 23269700
    MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
    "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
    "Physiol Genomics (2013) 45:151-161