miRBase entry: oar-mir-23a

Stem-loop oar-mir-23a


Accession
MI0025270
Description
Ovis aries oar-mir-23a precursor miRNA
Gene family
MIPF0000027; mir-23

Literature search
4 open access papers mention oar-mir-23a
(5 sentences)

Sequence

170961 reads, 30008 reads per million, 13 experiments
ggccggcugggguuccuggggaugggauuugcugccugucacaaAUCACAUUGCCAGGGAUUUCCAaccgacc
((.(((.((((((((((((.((((.((((((.((.....)))))))).)))).))))))).))))).))).))

Structure
  c   c     -       g    g      c  c 
gg cgg ugggg uuccugg gaug gauuug ug c
|| ||| ||||| ||||||| |||| |||||| || u
cc gcc ACCUU AGGGACC UUAC CUAaac ac g
  a   a     U       G    A      -  u 


Annotation confidence Not enough data
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Genome context
chr5: 9882124-9882196 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from oar-mir-23a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oar-miR-23a

Accession MIMAT0030048
Description Ovis aries oar-miR-23a mature miRNA
Sequence 45 - AUCACAUUGCCAGGGAUUUCCA - 66
Evidence experimental
cloned [1]

References

  1. PubMed ID: 23269700
    MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
    "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
    "Physiol Genomics (2013) 45:151-161