miRBase entry: oar-mir-27a

Stem-loop oar-mir-27a


Accession
MI0025275
Description
Ovis aries oar-mir-27a precursor miRNA
Gene family
MIPF0000036; mir-27

Literature search
6 open access papers mention oar-mir-27a
(25 sentences)

Sequence

78580 reads, 13605 reads per million, 13 experiments
uggccuggggagcagggcuuagcugcuugugagcagguccacaucaagucgugUUCACAGUGGCUAAGUUCCGCcccc
......((((.((.(((((((((((((.(((((((.(.(........).).)))))))))))))))))))).))))))

Structure
uggccu    a  a             u       g u cac 
      gggg gc gggcuuagcugcu gugagca g c   a
      |||| || ||||||||||||| ||||||| | |    
      cccc CG CUUGAAUCGGUGA CACUUgu c g   u
------    -  C             -       g u aac 


Annotation confidence High
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Genome context
chr5: 9882298-9882375 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from oar-mir-27a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oar-miR-27a

Accession MIMAT0030053
Description Ovis aries oar-miR-27a mature miRNA
Sequence 54 - UUCACAGUGGCUAAGUUCCGC - 74
Evidence experimental
cloned [1]

References

  1. PubMed ID: 23269700
    MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
    "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
    "Physiol Genomics (2013) 45:151-161