Stem-loop oar-mir-30b

Accession

MI0025278

Description

Ovis aries oar-mir-30b precursor miRNA

Gene family

MIPF0000005; mir-30

Literature search

2 open access papers mention oar-mir-30b
(4 sentences)

Sequence

62911 reads, 14115 reads per million, 13 experiments

ccaaguuuccaguucaUGUAAACAUCCUACACUCAGCuguaacacuugagucggcugggagguggauguuuacuucagcugacuugga
((((((...(((((...((((((((((.((.((((((((..((......))))))))))..))))))))))))...))))))))))).

Structure

-      uuc     caU          U  -A        ua  ac 
 ccaagu   caguu   GUAAACAUCC AC  CUCAGCug  ac  u
 ||||||   |||||   |||||||||| ||  ||||||||  ||   
 gguuca   gucga   cauuuguagg ug  gggucggc  ug  u
a      ---     cuu          -  ga        --  ag 

Annotation confidence High

Genome context

chr9: 19941548-19941635 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oar-mir-30b

Mature oar-miR-30b

• Accession: MIMAT0030057
• Description: Ovis aries oar-miR-30b mature miRNA
• Sequence: 17 - UGUAAACAUCCUACACUCAGC - 37
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161