miRBase entry: oar-mir-99a

Stem-loop oar-mir-99a


Accession
MI0025285
Description
Ovis aries oar-mir-99a precursor miRNA
Gene family
MIPF0000033; mir-10

Literature search
3 open access papers mention oar-mir-99a
(6 sentences)

Sequence

14999 reads, 2417 reads per million, 13 experiments
cccauuggcauaAACCCGUAGAUCCGAUCUUGuggugaaguggaccgcacaagcucgcuucuaugggucugugucagugug
..((((((((((.(((((((((..(((.((((((.((........)))))))).)))..))))))))).))))))))))..

Structure
cc          A         UC   U      g  aag 
  cauuggcaua ACCCGUAGA  CGA CUUGug ug   u
  |||||||||| |||||||||  ||| |||||| ||    
  gugacugugu uggguaucu  gcu gaacac gc   g
gu          c         uc   c      -  cag 


Annotation confidence Not enough data
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Genome context
chr1: 138652383-138652463 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from oar-mir-99a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oar-miR-99a

Accession MIMAT0030064
Description Ovis aries oar-miR-99a mature miRNA
Sequence 13 - AACCCGUAGAUCCGAUCUUG - 32
Evidence experimental
cloned [1]

References

  1. PubMed ID: 23269700
    MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
    "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
    "Physiol Genomics (2013) 45:151-161