Stem-loop bdi-MIR156h

Accession

MI0025293

Description

Brachypodium distachyon bdi-MIR156h precursor miRNA

Literature search

5 open access papers mention bdi-MIR156h
(25 sentences)

Sequence

cggcuugggcggUGACAGAAGAGAGUGAGCACacggccggucgucacacgacggcgccgccgugucgcggccgcguGCUCACUGCUCUUCCUGUCAUCcacuagcucu
.((((.((..((((((((((((((((((((((.(((((((((((...)))))(((((....))))).)))))).))))))))).))))).))))))))..))))))..

Structure

-c    u  gc        -     -         a      ---------------     c 
  ggcu gg  ggUGACAG AAGAG AGUGAGCAC cggccg               gucgu  
  |||| ||  |||||||| ||||| ||||||||| ||||||               ||||| a
  ucga uc  CUACUGUC UUCUC UCACUCGug gccggc               cagca  
uc    -  ac        C     G         c      gcugugccgccgcgg     c 

Annotation confidence Not enough data

Genome context

3: 49973597-49973704 [-]

Mature bdi-miR156h-5p

• Accession: MIMAT0030077
• Description: Brachypodium distachyon bdi-miR156h-5p mature miRNA
• Sequence: 13 - UGACAGAAGAGAGUGAGCAC - 32
• Evidence: experimental ; Illumina [1]

Mature bdi-miR156h-3p

• Accession: MIMAT0030078
• Description: Brachypodium distachyon bdi-miR156h-3p mature miRNA
• Sequence: 77 - GCUCACUGCUCUUCCUGUCAUC - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443