miRBase entry: bdi-MIR166i

Stem-loop bdi-MIR166i


Accession
MI0025297
Description
Brachypodium distachyon bdi-MIR166i precursor miRNA
Gene family
MIPF0000004; MIR166

Literature search
2 open access papers mention bdi-MIR166i
(16 sentences)

Sequence

ucuuguugaggGGCAUGUCGUGUGGCCCGAGAccgguucauggccgucgaucggucggcuaaugucgccggcggcgcgcgucaguggauggucUCGGACCAGGCUUCAUUCCCCccaacggc
..((((((.((((.(((..((.(((.(((((((((.(((((((((((((.((((.((((....)))))))))))))...)))).))))))))))))).))).))..))).)))).)))))).

Structure
uc      a    C   UC  G   C         g    -    ---     a    u    u 
  uuguug ggGG AUG  GU UGG CCGAGAccg uuca uggc   cgucg ucgg cggc a
  |||||| |||| |||  || ||| ||||||||| |||| ||||   ||||| |||| ||||  
  ggcaac CCCC UAC  CG ACC GGCUcuggu aggu acug   gcggc ggcc gcug a
-c      c    U   UU  G   A         -    g    cgc     -    -    u 


Annotation confidence Not enough data
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Genome context
3: 27457696-27457817 [-]

Database links

Mature bdi-miR166i-5p

Accession MIMAT0030089
Description Brachypodium distachyon bdi-miR166i-5p mature miRNA
Sequence 12 - GGCAUGUCGUGUGGCCCGAGA - 32
Evidence experimental
Illumina [1]

Mature bdi-miR166i-3p

Accession MIMAT0030090
Description Brachypodium distachyon bdi-miR166i-3p mature miRNA
Sequence 94 - UCGGACCAGGCUUCAUUCCCC - 114
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23264558
    Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
    "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
    "Mol Plant (2013) 6:423-443