Stem-loop bdi-MIR5185e

Accession

MI0025309

Description

Brachypodium distachyon bdi-MIR5185e precursor miRNA

Gene family

MIPF0001246; MIR5185

Literature search

1 open access papers mention bdi-MIR5185e
(1 sentences)

Sequence

ggaucccgugaaagucccgcUUCUAGUUCAUUUUUCAAAUCuucuauucaaaauuuuguucagaauuugaauaagagaUUUGAGAAUUGAACUAGAAGCgggacuuucgcgggau
..((((((((((((((((((((((((((((.((((((((((((.((((((((.((((....)))))))))))).)))))))))))).))))))))))))))))))))))))))))

Structure

gg                            U            c        a    g 
  aucccgugaaagucccgcUUCUAGUUCA UUUUCAAAUCuu uauucaaa uuuu u
  |||||||||||||||||||||||||||| |||||||||||| |||||||| ||||  
  uagggcgcuuucagggCGAAGAUCAAGU AAGAGUUUagag auaaguuu aaga u
--                            U            a        -    c 

Annotation confidence Not enough data

Genome context

1: 50946307-50946421 [-]

Mature bdi-miR5185e-5p

• Accession: MIMAT0030113
• Description: Brachypodium distachyon bdi-miR5185e-5p mature miRNA
• Sequence: 21 - UUCUAGUUCAUUUUUCAAAUC - 41
• Evidence: experimental ; Illumina [1]

Mature bdi-miR5185e-3p

• Accession: MIMAT0030114
• Description: Brachypodium distachyon bdi-miR5185e-3p mature miRNA
• Sequence: 79 - UUUGAGAAUUGAACUAGAAGC - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443