miRBase entry: bdi-MIR5185l

Stem-loop bdi-MIR5185l


Accession
MI0025316
Description
Brachypodium distachyon bdi-MIR5185l precursor miRNA
Gene family
MIPF0001246; MIR5185

Literature search
1 open access papers mention bdi-MIR5185l
(1 sentences)

Sequence

acuuauaucccgcUUCUAAGUCAAUCUCUAAAUCcacgagucaaauucaaugcuuauauuugacuuguggaUUUGGAGAUUGACUUAGAAGCgggauuaggcgg
.((((.((((((((((((((((((((((((((((((((((((((((...........))))))))))))))))))))))))))))))))))))))))))))...

Structure
--a    u                                        ucaa 
   cuua aucccgcUUCUAAGUCAAUCUCUAAAUCcacgagucaaau    u
   |||| ||||||||||||||||||||||||||||||||||||||||    g
   ggau uagggCGAAGAUUCAGUUAGAGGUUUagguguucaguuua    c
ggc    -                                        uauu 


Annotation confidence Not enough data
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Genome context
1: 50986582-50986685 [-]

Database links

Mature bdi-miR5185l-5p

Accession MIMAT0030127
Description Brachypodium distachyon bdi-miR5185l-5p mature miRNA
Sequence 14 - UUCUAAGUCAAUCUCUAAAUC - 34
Evidence experimental
Illumina [1]

Mature bdi-miR5185l-3p

Accession MIMAT0030128
Description Brachypodium distachyon bdi-miR5185l-3p mature miRNA
Sequence 72 - UUUGGAGAUUGACUUAGAAGC - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23264558
    Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
    "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
    "Mol Plant (2013) 6:423-443