Stem-loop bdi-MIR7717a

Accession

MI0025328

Description

Brachypodium distachyon bdi-MIR7717a precursor miRNA

Gene family

MIPF0001715; MIR7717

Sequence

auaacaauuuuuuaauucaaUCAUUGAGAUUCGUGUAAAUUAAugugguccgauggauaaaaaaaucuucauuucGAUGGAUACGAUUGUCGACUGAGAaauaacuauauuuua
....................(((((((.(.((((((..(((...((((...(((..........))).))))...)))..)))))).).)))).)))((((((....)))))).

Structure

auaacaauuuuuuaauucaa   -    G U      AA   AAu    ucc   ggau 
                    UCA UUGA A UCGUGU  AUU   gugg   gau    a
                    ||| |||| | ||||||  |||   ||||   |||     
                    AGU AGCU U AGCAUA  UAG   uacu   cua    a
---auuuuauaucaauaaAG   C    G U      GG   cuu    --u   aaaa 

Annotation confidence Not enough data

Genome context

1: 28244716-28244829 [-]

Mature bdi-miR7717a-5p

• Accession: MIMAT0030156
• Description: Brachypodium distachyon bdi-miR7717a-5p mature miRNA
• Sequence: 21 - UCAUUGAGAUUCGUGUAAAUUAA - 43
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7717a-3p

• Accession: MIMAT0030157
• Description: Brachypodium distachyon bdi-miR7717a-3p mature miRNA
• Sequence: 76 - GAUGGAUACGAUUGUCGACUGAGA - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443