Stem-loop bdi-MIR7720

Accession

MI0025332

Description

Brachypodium distachyon bdi-MIR7720 precursor miRNA

Sequence

gucgugggggcaauuUCGAAAUUGAUCGUGCGGAGAAGCcucagaaacugcucgagaccgguuucucguaggaacccUUUUACACAUGAUUUGGGUUGGACcucuaguagca
((..((((((....(((((....(((((((.(..((((((((((((((((........)))))))).).)))....))))..).)))))))....)))))))))))...)).

Structure

-  -cg      caau     AAUU       C GA    ----   - -        cuc 
 gu   uggggg    uUCGA    GAUCGUG G  GAAG    Ccu c agaaacug   g
 ||   ||||||    |||||    ||||||| |  ||||    ||| | ||||||||    
 cg   aucucC    AGGUU    UUAGUAC C  UUUc    gga g ucuuuggc   a
a  aug      ----     GGGU       A AU    ccaa   u c        cag 

Annotation confidence Not enough data

Genome context

5: 17999321-17999432 [-]

Mature bdi-miR7720-5p

• Accession: MIMAT0030164
• Description: Brachypodium distachyon bdi-miR7720-5p mature miRNA
• Sequence: 16 - UCGAAAUUGAUCGUGCGGAGAAGC - 39
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7720-3p

• Accession: MIMAT0030165
• Description: Brachypodium distachyon bdi-miR7720-3p mature miRNA
• Sequence: 78 - UUUUACACAUGAUUUGGGUUGGAC - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443