Stem-loop bdi-MIR7725a

Accession

MI0025339

Description

Brachypodium distachyon bdi-MIR7725a precursor miRNA

Gene family

MIPF0001792; MIR7725

Sequence

gaaaugaaucuUGACGAGAUCACAUCGUUUGCACAcaaaaucuuggcgaacuagggagaugguuuucgcuaugcuccaccucauaucugacugaaauagaauuuuguucuuccaugauguaauuuagucaaauaagaggagacaagacauagugaaaaccauauuccuagcucgccauggcagggcaucaggacaacauuuugugUGCAAACAAUGUGAUUUCGUCAAGauucauuucau
(((((((((((((((((((((((((.((((((((((((((((.((((((.(((((((.(((((((((((((((((.(.((((.(((.((((((((.((..(((.((......)).))).)).)))))))).))).)))).)...)).))))))))))))))).))))))).)))))).)((...))...........))))))))))))))).)))))))))))))))))))))))))..

Structure

--                         C               ------------------ u      a       g               -  --c a    a   c        a  ga   u  uu 
  gaaaugaaucuUGACGAGAUCACAU GUUUGCACAcaaaau                  c uggcga cuaggga augguuuucgcuaug cu   c ccuc uau ugacugaa ua  auu ug  c
  ||||||||||||||||||||||||| |||||||||||||||                  | |||||| ||||||| ||||||||||||||| ||   | |||| ||| |||||||| ||  ||| ||   
  cuuuacuuaGAACUGCUUUAGUGUA CAAACGUguguuuua                  g accgcu gauccuu uaccaaaagugauac ga   g ggag aua acugauuu au  uag ac  u
ua                         A               caacaggacuacgggacg u      c       a               a  aca a    a   a        a  -g   u  cu 

Annotation confidence Not enough data

Genome context

1: 1326421-1326660 [-]

Mature bdi-miR7725a-5p

• Accession: MIMAT0030178
• Description: Brachypodium distachyon bdi-miR7725a-5p mature miRNA
• Sequence: 12 - UGACGAGAUCACAUCGUUUGCACA - 35
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7725a-3p

• Accession: MIMAT0030179
• Description: Brachypodium distachyon bdi-miR7725a-3p mature miRNA
• Sequence: 206 - UGCAAACAAUGUGAUUUCGUCAAG - 229
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443