miRBase entry: bdi-MIR7725b

Stem-loop bdi-MIR7725b


Accession
MI0025340
Description
Brachypodium distachyon bdi-MIR7725b precursor miRNA
Gene family
MIPF0001792; MIR7725


Sequence

aucuuggcgaACUAGGGAGAUGGUUUUCGCUAUGCUCCACCUCAUAUUUGACugaaauagaauuuuguucuuccaugauguaauuuaguCAAAUAAGAGGAGACGAGACAUAGUGAAAACCAUAUUCCUAGCUCgccauggcagg
.((.((((((.(((((((.((((((((((((((((((..((((.((((((((((((.((..(((.((......)).))).)).)))))))))))).))))....))).))))))))))))))).))))))).)))))).))....

Structure
---a  u      A       G               -   --CA    A            a  ga   u  uu 
    uc uggcga CUAGGGA AUGGUUUUCGCUAUG CUC    CCUC UAUUUGACugaa ua  auu ug  c
    || |||||| ||||||| ||||||||||||||| |||    |||| |||||||||||| ||  ||| ||   
    gg accgCU GAUCCUU UACCAAAAGUGAUAC GAG    GGAG AUAAACugauuu au  uag ac  u
ggac  u      C       A               A   CAGA    A            a  -g   u  cu 


Annotation confidence Not enough data
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Genome context
1: 9582818-9582962 [+]

Database links

Mature bdi-miR7725b-5p.1

Accession MIMAT0030180
Description Brachypodium distachyon bdi-miR7725b-5p.1 mature miRNA
Sequence 11 - ACUAGGGAGAUGGUUUUCGCU - 31
Evidence experimental
Illumina [1]

Mature bdi-miR7725b-5p.2

Accession MIMAT0030181
Description Brachypodium distachyon bdi-miR7725b-5p.2 mature miRNA
Sequence 32 - AUGCUCCACCUCAUAUUUGAC - 52
Evidence experimental
Illumina [1]

Mature bdi-miR7725b-3p.2

Accession MIMAT0030182
Description Brachypodium distachyon bdi-miR7725b-3p.2 mature miRNA
Sequence 90 - CAAAUAAGAGGAGACGAGACAUAG - 113
Evidence experimental
Illumina [1]

Mature bdi-miR7725b-3p.1

Accession MIMAT0030183
Description Brachypodium distachyon bdi-miR7725b-3p.1 mature miRNA
Sequence 114 - UGAAAACCAUAUUCCUAGCUC - 134
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23264558
    Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
    "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
    "Mol Plant (2013) 6:423-443