miRBase entry: bdi-MIR7735

Stem-loop bdi-MIR7735


Accession
MI0025352
Description
Brachypodium distachyon bdi-MIR7735 precursor miRNA


Sequence

gguaaacgucgUUGUUUUCCUUCUGCACUCCCGGCggcacgcccgugagcgagcucgaugcugcaucuggaccucggaaccacgucggagccagaaaaacguuauugacguagcagccuggaagucgCCGGUCGGAGCCAAGAGACGCGGCgacaaugaucu
(((....((((((((.((.(((..((.((.((((((((.(((......)))...((.(.(((((.(((((..(((.((......)).))))))))...(((((...))))).))))).).)).))))))))..)).)).))).)).))))))))....))).

Structure
-   aaac        U  C   CU  A  -C        acgcccgugagcgagc  g u     ----------------a     ac   g  ac 
 ggu    gucgUUGU UU CUU  GC CU  CCGGCggc                uc a gcugc                 ucugg  cuc ga  c
 |||    |||||||| || |||  || ||  ||||||||                || | |||||                 |||||  ||| ||   
 cua    cagCGGCG AG GAA  CG GG  GGCCgcug                ag u cgacg                 agacc  gag cu  a
u   guaa        C  A   -C  A  CU        ---------------a  g c     augcaguuauugcaaaa     --   g  gc 


Annotation confidence Not enough data
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Genome context
1: 48106343-48106504 [+]

Database links

Mature bdi-miR7735-5p

Accession MIMAT0030206
Description Brachypodium distachyon bdi-miR7735-5p mature miRNA
Sequence 12 - UUGUUUUCCUUCUGCACUCCCGGC - 35
Evidence experimental
Illumina [1]

Mature bdi-miR7735-3p

Accession MIMAT0030207
Description Brachypodium distachyon bdi-miR7735-3p mature miRNA
Sequence 128 - CCGGUCGGAGCCAAGAGACGCGGC - 151
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23264558
    Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
    "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
    "Mol Plant (2013) 6:423-443