miRBase entry: bdi-MIR7747

Stem-loop bdi-MIR7747


Accession
MI0025365
Description
Brachypodium distachyon bdi-MIR7747 precursor miRNA


Sequence

auuaucacgggAUCAGAUUGUUUUGUUGUAGGAUGaugaaguguuguucgccgaucggauuguauguuguguucuuggacuaugauaguuuaugucgaaugcacuuuugauuuucagauugugcguacuguaguuuacucuagaucguguguaucgcagauuuucauguuccucuucaagaguuucuaaaagagagaauacgaaaaucuguaguacacacaaucugaaaaacaaaaguacauucaacacugccauaguucgacaacaaaacacauauucugaucggcagacgacacuucAUCCUAUAACAAAACAAACUGAUCucuuacuaau
........((((((((.(((((((((((((((((((...(((((((((.((((((((((.(((.((((.((((.((((((((((.((((....((.(((((.(((((((.(((((((((((((((..(((.((....)).)))..)))((((((.((((((((((.((((((((((..(((...)))..))))).))))).)))))))))).)))))))))))))))))).))))))).))))).)))))).)))))))))).)))).)))).))).)))))))))).)))))))))))))))))))))))))))).))))))))........

Structure
auuaucac        A                   uga         c          u   a    g    c          a    uuau  c     c       a            gcguacuguaguuuacucuagaucgu      c          a     -     ca   g 
        gggAUCAG UUGUUUUGUUGUAGGAUGa   aguguuguu gccgaucgga ugu uguu uguu uuggacuaug uagu    gu gaaug acuuuug uuuucagauugu                          guguau gcagauuuuc uguuc cucuu  aga  
        |||||||| |||||||||||||||||||   ||||||||| |||||||||| ||| |||| |||| |||||||||| ||||    || ||||| ||||||| ||||||||||||                          |||||| |||||||||| ||||| |||||  ||| u
        cuCUAGUC AACAAAACAAUAUCCUAcu   ucacagcag cggcuagucu aua acaa acaa agcuugauac guca    ca cuuac ugaaaac aaaagucuaaca                          cacaug ugucuaaaag auaag gagaa  ucu  
uaaucauu        A                   ---         a          u   c    a    c          c    ----  a     a       a            --------------------------      a          c     a     aa   u 


Annotation confidence Not enough data
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Genome context
1: 53276108-53276440 [-]

Database links

Mature bdi-miR7747-5p

Accession MIMAT0030234
Description Brachypodium distachyon bdi-miR7747-5p mature miRNA
Sequence 12 - AUCAGAUUGUUUUGUUGUAGGAUG - 35
Evidence experimental
Illumina [1]

Mature bdi-miR7747-3p

Accession MIMAT0030235
Description Brachypodium distachyon bdi-miR7747-3p mature miRNA
Sequence 300 - AUCCUAUAACAAAACAAACUGAUC - 323
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23264558
    Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
    "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
    "Mol Plant (2013) 6:423-443