Stem-loop bdi-MIR7776

Accession

MI0025398

Description

Brachypodium distachyon bdi-MIR7776 precursor miRNA

Sequence

ccccaucauaacCUUGCCCUCUGAUAUCUUGGACAUUCAACUCAUUAUUAAUGagggacaacaacaaugaaguuagagucgaaguuauuguccucgUUGAUAAUGGGUUGAAUGCGCAAAGAUAUCAGAGGGCAACGcuaugaugga
..((((((((.(.((((((((((((((((((..(((((((((((((((((((((((.((((.(((..(((........)))..))).)))))))))))))))))))))))))))..).))))))))))))))))).).)))))))).

Structure

cc        a C                 - GA                       g    c   aa   agu 
  ccaucaua c UUGCCCUCUGAUAUCUU G  CAUUCAACUCAUUAUUAAUGagg acaa aac  uga   u
  |||||||| | ||||||||||||||||| |  ||||||||||||||||||||||| |||| |||  |||    
  gguaguau G AACGGGAGACUAUAGAA C  GUAAGUUGGGUAAUAGUUgcucc uguu uug  gcu   a
-a        c C                 A GC                       -    a   aa   gag 

Annotation confidence Not enough data

Genome context

2: 54086906-54087052 [-]

Mature bdi-miR7776-5p.1

• Accession: MIMAT0030302
• Description: Brachypodium distachyon bdi-miR7776-5p.1 mature miRNA
• Sequence: 13 - CUUGCCCUCUGAUAUCUUGG - 32
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7776-5p.2

• Accession: MIMAT0030303
• Description: Brachypodium distachyon bdi-miR7776-5p.2 mature miRNA
• Sequence: 33 - ACAUUCAACUCAUUAUUAAUG - 53
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7776-3p.2

• Accession: MIMAT0030304
• Description: Brachypodium distachyon bdi-miR7776-3p.2 mature miRNA
• Sequence: 97 - UUGAUAAUGGGUUGAAUGCGC - 117
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7776-3p.1

• Accession: MIMAT0030305
• Description: Brachypodium distachyon bdi-miR7776-3p.1 mature miRNA
• Sequence: 118 - AAAGAUAUCAGAGGGCAACG - 137
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443