Stem-loop bdi-MIR7777

Accession

MI0025399

Description

Brachypodium distachyon bdi-MIR7777 precursor miRNA

Sequence

uguguagcgguauCUUUGGUUGGGUAGAACUACCUCUGACAAACACCAUCGCAACugcaguauaucauguuauuauuguacccaugauguccuguuguUGAGAUGGUGUCUGUUGAAGGUUGUUCCACCCAACAGAAGAUgugacacauau
(((((.((...((((((.(((((((.((((.((((.(((((.((((((((.((((.((((.((((((((.(((....)))..)))))))).)))).)))).)))))))).))))).)))).)))).))))))).)))))))).)))))...

Structure

---     a  ggu      G       A    U    C     A        G    u    u        -u   u 
   ugugu gc   auCUUU GUUGGGU GAAC ACCU UGACA ACACCAUC CAAC gcag auaucaug  uau a
   ||||| ||   |||||| ||||||| |||| |||| ||||| |||||||| |||| |||| ||||||||  |||  
   acaca ug   UAGAAG CAACCCA CUUG UGGA GUUGU UGUGGUAG GUug uguc uguaguac  aug u
uau     g  ---      A       C    U    A     C        A    u    c        cc   u 

Annotation confidence Not enough data

Genome context

1: 65552800-65552950 [-]

Mature bdi-miR7777-5p.1

• Accession: MIMAT0030306
• Description: Brachypodium distachyon bdi-miR7777-5p.1 mature miRNA
• Sequence: 14 - CUUUGGUUGGGUAGAACUACC - 34
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7777-5p.2

• Accession: MIMAT0030307
• Description: Brachypodium distachyon bdi-miR7777-5p.2 mature miRNA
• Sequence: 35 - UCUGACAAACACCAUCGCAAC - 55
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7777-3p.2

• Accession: MIMAT0030308
• Description: Brachypodium distachyon bdi-miR7777-3p.2 mature miRNA
• Sequence: 99 - UGAGAUGGUGUCUGUUGAAGG - 119
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7777-3p.1

• Accession: MIMAT0030309
• Description: Brachypodium distachyon bdi-miR7777-3p.1 mature miRNA
• Sequence: 120 - UUGUUCCACCCAACAGAAGAU - 140
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443