Stem-loop bta-mir-7858

Accession

MI0025528

Description

Bos taurus bta-mir-7858 precursor miRNA

Sequence

6982 reads, 182 reads per million, 69 experiments

uaggauuuggaaagauugcuuugaauuuguagaucaACGCAAUUCUUCAAAAUCUUAGC
((((((((.(((.((((((.((((.........)))).)))))).))).))))))))..

Structure

--        g   a      u    auu 
  uaggauuu gaa gauugc uuga   u
  |||||||| ||| |||||| ||||   g
  AUUCUAAA CUU UUAACG Aacu   u
CG        A   C      C    aga 

Annotation confidence Not enough data

Genome context

chr20: 10233343-10233401 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-7858

Mature bta-miR-7858

• Accession: MIMAT0030433
• Description: Bos taurus bta-miR-7858 mature miRNA
• Sequence: 37 - ACGCAAUUCUUCAAAAUCUUAGC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23472090
   Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection
   Lawless N, Foroushani AB, McCabe MS, O'Farrelly C, Lynn DJ
   PLoS One (2013) 8:e57543