Stem-loop bta-mir-664b

Accession

MI0025533

Description

Bos taurus bta-mir-664b precursor miRNA

Literature search

4 open access papers mention bta-mir-664b
(4 sentences)

Sequence

302600 reads, 118.0 reads per million, 321 experiments

CAGGCUAGGAGAAAUGAUUGGAUagaaaauuuuauucUAUUCAUUUAUCUCCCAGCCUAC
.(((((.(((((..(((.(((((((((.......))))))))).)))))))).)))))..

Structure

-C     A     AA   U         aa 
  AGGCU GGAGA  UGA UGGAUagaa  u
  ||||| |||||  ||| |||||||||  u
  UCCGA CCUCU  AUU ACUUAUcuu  u
CA     C     --   U         au 

Annotation confidence High

Genome context

16: 23682029-23682088 [-]

Mature bta-miR-664b-5p

• Accession: MIMAT0051051
• Description: Bos taurus bta-miR-664b-5p mature miRNA
• Sequence: 1 - CAGGCUAGGAGAAAUGAUUGGAU - 23
• Evidence: experimental ; Illumina [1]

Mature bta-miR-664b-3p

• Accession: MIMAT0030438
• Description: Bos taurus bta-miR-664b-3p mature miRNA
• Sequence: 38 - UAUUCAUUUAUCUCCCAGCCUAC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23472090
   Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection
   Lawless N, Foroushani AB, McCabe MS, O'Farrelly C, Lynn DJ
   PLoS One (2013) 8:e57543