Stem-loop bta-mir-219-2

Accession

MI0025539

Description

Bos taurus bta-mir-219-2 precursor miRNA

Literature search

4 open access papers mention bta-mir-219-2
(6 sentences)

Sequence

21502 reads, 34.0 reads per million, 233 experiments

UGAUUGUCCAAACGCAAUUCUCGagucucuagcucuggccgAGAGUUGAGUCUGGACGUCCCG
.(((.(((((.((.(((((((((.(((.........)))))))))))).)).))))))))...

Structure

--U   U     A  G         a   ucu 
   GAU GUCCA AC CAAUUCUCG guc   a
   ||| ||||| || ||||||||| |||   g
   CUG CAGGU UG GUUGAGAgc cgg   c
GCC   -     C  A         -   ucu 

Annotation confidence High

Genome context

23: 7394820-7394882 [+]

Mature bta-miR-219-2-5p

• Accession: MIMAT0060922
• Description: Bos taurus bta-miR-219-2-5p mature miRNA
• Sequence: 1 - UGAUUGUCCAAACGCAAUUCUCG - 23
• Evidence: experimental ; Illumina [1]

Mature bta-miR-219-2-3p

• Accession: MIMAT0060923
• Description: Bos taurus bta-miR-219-2-3p mature miRNA
• Sequence: 42 - AGAGUUGAGUCUGGACGUCCCG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23472090
   Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection
   Lawless N, Foroushani AB, McCabe MS, O'Farrelly C, Lynn DJ
   PLoS One (2013) 8:e57543