miRBase entry: stu-MIR7992

Stem-loop stu-MIR7992


Accession
MI0025777
Description
Solanum tuberosum stu-MIR7992 precursor miRNA

Literature search
2 open access papers mention stu-MIR7992
(8 sentences)

Sequence

UUUGACAAUGCACAUCUAGACACUuaacuugguuuaaguuggccucauaaacacccaaauuugagaaugcacauccagaaaaguguguuuacggggccaacuuaaaccaaauuauggUGUCUAGAUGUGCAUUUCAAAGU
(((((.(((((((((((((((((((((.((((((((((((((((((.(((((((.....((((.((.......)))))).....))))))).)))))))))))))))))).))).)))))))))))))))))))))))..

Structure
--     C                  -   c                  a       ccaaa    a  au 
  UUUGA AAUGCACAUCUAGACACU uaa uugguuuaaguuggccuc uaaacac     uuug ga  g
  ||||| |||||||||||||||||| ||| |||||||||||||||||| |||||||     |||| ||  c
  AAACU UUACGUGUAGAUCUGUgg auu aaccaaauucaaccgggg auuugug     agac cu  a
UG     -                  u   a                  c       ugaaa    -  ac 


Annotation confidence Not enough data
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Genome context
JH137824.1: 720823-720962 [-]

Database links

Mature stu-miR7992-5p

Accession MIMAT0030868
Description Solanum tuberosum stu-miR7992-5p mature miRNA
Sequence 1 - UUUGACAAUGCACAUCUAGACACU - 24
Evidence experimental
Illumina [1]

Mature stu-miR7992-3p

Accession MIMAT0031186
Description Solanum tuberosum stu-miR7992-3p mature miRNA
Sequence 118 - UGUCUAGAUGUGCAUUUCAAAGU - 140
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233