miRBase entry: stu-MIR7994b

Stem-loop stu-MIR7994b


Accession
MI0025789
Description
Solanum tuberosum stu-MIR7994b precursor miRNA
Gene family
MIPF0001763; MIR7994


Sequence

AGUUUAUGCCCAAGUAUAUAAUAUAUaauauucaagauugagacuuuuaaaagggaguuuauguccaaguauaauauauaauauucaagauuagaacuuuagucccaaucuugaauauuauAUAUUAUACUUGGGCAUAAACUCC
((((((((((((((((((..((((((((((((((((((((.((((........(((((((..(((..(((((........)))))...)))..))))))))))).))))))))))))))))))))))))))))))))))))))..

Structure
--                  UA                    a    uuuaaaag       au   -ca     aau 
  AGUUUAUGCCCAAGUAUA  AUAUAUaauauucaagauug gacu        ggaguuu  guc   aguau   a
  ||||||||||||||||||  |||||||||||||||||||| ||||        |||||||  |||   |||||    
  UCAAAUACGGGUUCAUAU  UAUAuauuauaaguucuaac cuga        uuucaag  uag   uuaua   u
CC                  --                    c    --------       au   aac     aua 


Annotation confidence Not enough data
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Genome context
JH137885.1: 442742-442886 [-]

Database links

Mature stu-miR7994b-5p

Accession MIMAT0031188
Description Solanum tuberosum stu-miR7994b-5p mature miRNA
Sequence 1 - AGUUUAUGCCCAAGUAUAUAAUAUAU - 26
Evidence experimental
Illumina [1]

Mature stu-miR7994b-3p

Accession MIMAT0030880
Description Solanum tuberosum stu-miR7994b-3p mature miRNA
Sequence 122 - AUAUUAUACUUGGGCAUAAACUCC - 145
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233