miRBase entry: stu-MIR8002

Stem-loop stu-MIR8002


Accession
MI0025801
Description
Solanum tuberosum stu-MIR8002 precursor miRNA


Sequence

UUUUUCGUGAUAAUAAUGGAAUCAugauauguuagaguuguuguugauuucaacguaaauaaacuaaauaugAUUCCAUUAUUAUCAAGAAAAAAG
((((((.(((((((((((((((((((....(((...(((..(((((....)))))..))).)))....))))))))))))))))))).))))))..

Structure
--      G                   auau   aga   gu     a 
  UUUUUC UGAUAAUAAUGGAAUCAug    guu   guu  uguug u
  |||||| |||||||||||||||||||    |||   |||  |||||  
  AAAAAG ACUAUUAUUACCUUAguau    caa   uaa  gcaac u
GA      A                   aaau   --a   au     u 


Annotation confidence Not enough data
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Genome context
JH137874.1: 704336-704431 [-]

Database links

Mature stu-miR8002-5p

Accession MIMAT0030892
Description Solanum tuberosum stu-miR8002-5p mature miRNA
Sequence 1 - UUUUUCGUGAUAAUAAUGGAAUCA - 24
Evidence experimental
Illumina [1]

Mature stu-miR8002-3p

Accession MIMAT0031190
Description Solanum tuberosum stu-miR8002-3p mature miRNA
Sequence 73 - AUUCCAUUAUUAUCAAGAAAAAAG - 96
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233